Low FODMAP Apple Crisp: Easy, Gut-Friendly Dessert

Updated November 7, 2026

Total time
1 hr
prep 20 min · cook 40 min
Serves
6
portions as written

Jump to recipe

Low FODMAP Apple Crisp: Easy, Gut-Friendly Dessert

This Low FODMAP Apple Crisp delivers all the warm, cinnamon-spiced comfort of a classic fall dessert without the high-FODMAP ingredients that can trigger digestive discomfort. By choosing the right apple variety and swapping wheat flour for gluten-free oats, you get a crispy, buttery topping over tender, sweet apples that’s gentle on sensitive stomachs. It’s simple enough for a weeknight treat and special enough for a holiday table.

Ingredients

  • 6 cups (about 900 g) peeled, cored, and sliced low-FODMAP apples (e.g., Granny Smith, Red Delicious, or Fuji)
  • 2 tablespoons (30 ml) fresh lemon juice
  • 1/4 cup (50 g) granulated sugar
  • 1 teaspoon ground cinnamon
  • 1/4 teaspoon ground nutmeg (optional)
  • 1/2 cup (60 g) gluten-free old-fashioned oats (certified gluten-free if needed)
  • 1/2 cup (70 g) gluten-free all-purpose flour (or oat flour)
  • 1/2 cup (110 g) packed brown sugar
  • 1/4 teaspoon salt
  • 1/2 cup (115 g) cold unsalted butter, cut into small cubes (or dairy-free alternative)

Instructions

  1. Preheat your oven to 375°F (190°C). Lightly grease a 9×9-inch (or similar) baking dish.
  2. In a large bowl, toss the sliced apples with lemon juice, granulated sugar, cinnamon, and nutmeg (if using). Spread the apple mixture evenly in the prepared baking dish.
  3. In a separate medium bowl, combine the oats, gluten-free flour, brown sugar, and salt. Add the cold butter cubes and use a pastry blender or your fingers to work the butter into the dry ingredients until the mixture resembles coarse crumbs with some pea-sized butter pieces.
  4. Sprinkle the oat topping evenly over the apples.
  5. Bake for 35–40 minutes, or until the topping is golden brown and the apples are bubbling around the edges. If the topping browns too quickly, loosely cover with foil for the last 10 minutes.
  6. Let the crisp cool on a wire rack for at least 10 minutes before serving. Serve warm.

Tips

  • Choose the right apples: Apples are low FODMAP in servings of about 1 medium apple (roughly 150 g). Stick to varieties like Granny Smith, Red Delicious, or Fuji, and avoid high-FODMAP types like Gala or Honeycrisp in large amounts. Use about 6 medium apples for this recipe.
  • Make it dairy-free: Use cold coconut oil or a plant-based butter substitute in the topping. The texture will be slightly different but still delicious.
  • Don’t overmix the topping: Work the butter in until just combined. Overmixing can make the topping tough instead of crumbly.
  • Check for doneness: The apples should be fork-tender when pierced. If they’re still firm, bake for an additional 5–10 minutes.

Serving Suggestions

Serve this crisp warm, optionally topped with a scoop of lactose-free vanilla ice cream or a dollop of lactose-free whipped cream. It also pairs nicely with a cup of herbal tea or coffee for a cozy afternoon snack.

Variations

  • Add cranberries: Fold in 1/2 cup (60 g) fresh or frozen cranberries with the apples for a tart twist. Cranberries are low FODMAP.
  • Nutty topping: Add 1/4 cup (30 g) chopped pecans or walnuts to the oat topping. Nuts are low FODMAP in small servings (about 10–15 nuts).
  • Spice it up: Add 1/4 teaspoon ground ginger or allspice along with the cinnamon for extra warmth.
  • Sugar-free option: Replace the granulated and brown sugars with a low-FODMAP sweetener like maple syrup (use 1/4 cup for both) or a stevia-based baking blend, adjusting to taste.

Storage and Reheating

Store leftover crisp in an airtight container in the refrigerator for up to 4 days. To reheat, place a portion in the microwave for 30–60 seconds, or warm in a 350°F (175°C) oven for 10 minutes to restore crispness. The topping may soften upon storage, but it will still taste great.

Frequently Asked Questions

Can I use frozen apples? Yes, but thaw and drain them well first to avoid excess liquid. You may need to increase baking time by 5–10 minutes.

Is this recipe suitable for celiac disease? It can be, if you use certified gluten-free oats and gluten-free flour. Always check labels for cross-contamination.

Can I make this ahead of time? Yes, assemble the crisp (without baking) and refrigerate for up to 24 hours. Bake as directed, adding 5–10 minutes to the baking time since it starts cold.

What apples are lowest in FODMAPs? Granny Smith, Red Delicious, and Fuji are considered low FODMAP in 1-medium-apple servings. Avoid Gala and Honeycrisp, which are higher in FODMAPs.

Can I freeze the baked crisp? Yes, freeze in an airtight container for up to 3 months. Thaw overnight in the refrigerator and reheat in the oven at 350°F (175°C) until warmed through.

Why did my topping turn out soggy? Soggy topping usually happens if the apples release too much liquid. Be sure to use firm apples, and let the crisp rest after baking so the juices thicken slightly.

Related

More recipes to cook

Safety notes: safe minimum internal temperatures from USDA FSIS; raw and undercooked fish guidance from the U.S. FDA. Food safety notes

Spotted an error? Tell us and we will correct it (corrections policy).